Z =4 Mo K radiation = 0.14 mm 1. Data collection. Refinement. R[F 2 >2(F 2 )] = wr(f 2 ) = S = reflections 238 parameters
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1 organic compounds Acta Crystallographica Section E Structure Reports Online ISSN Benzamide picric acid (1/1) M. S. Sivaramkumar, a R. Velmurugan, b M. Sekar, b P. Ramesh c and M. N. Ponnuswamy c * a Post Graduate and Research Department of Chemistry, Kongunadu College of Arts and Science, Coimbatore , India, b Post Graduate and Research Department of Chemistry, Sri Ramakrishna Mission Vidyalaya College of Arts and Science, Coimbatore , India, and c Centre of Advanced Study in Crystallography and Biophysics, University of Madras, Guindy Campus, Chennai , India Correspondence mnpsy2004@yahoo.com Received 2 June 2010; accepted 22 June 2010 Z =4 Mo K radiation = 0.14 mm 1 Data collection Bruker SMART APEXII areadetector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.970, T max = Refinement R[F 2 >2(F 2 )] = wr(f 2 ) = S = reflections 238 parameters Table 1 Hydrogen-bond geometry (Å, ). T = 110 K mm 8136 measured reflections 3309 independent reflections 2518 reflections with I > 2(I) R int = H atoms treated by a mixture of independent and constrained refinement max = 0.28 e Å 3 min = 0.27 e Å 3 Key indicators: single-crystal X-ray study; T = 110 K; mean (C C) = Å; R factor = 0.040; wr factor = 0.102; data-to-parameter ratio = In the title compound, C 7 H 7 NOC 6 H 3 N 3 O 7, one of the nitro groups of the picric acid molecule lies in the plane of the attached benzene ring [dihedral angle = 1.4 (1) ] while the other two are twisted away by 9.9 (1) and 30.3 (1). In the benzamide molecule, the amide group is almost coplanar with the benzene ring [dihedral angle = 4.4 (1) ]. An intramolecular O HO hydrogen bond generates an S6 ring motif. In the crystal, molecules are linked into a ribbon-like structure along the b axis by O HO and N HO intermolecular hydrogen bonds. In addition, C HO hydrogen bonds and short OO contacts [2.828 (2) Å] are observed. Related literature For crystal structures of picric acid complexes, see: In et al. (1997); Zaderenko et al. (1997); Nagata et al. (1995); Smith et al. (2004); Goto et al. (2004). For graph-set notation, see: Bernstein et al. (1995). D HA D H HA DA D HA O1 H1O (3) 1.92 (3) (16) 132 (2) O1 H1O (3) 1.85 (3) (16) 130 (2) N4 H4AO7 i 0.87 (2) 2.33 (2) (2) 150 (2) N4 H4BO8 i 0.90 (2) 2.08 (2) (19) 167 (2) C5 H5O6 ii (2) 152 C9 H9O4 iii (2) 129 Symmetry codes: (i) x; y þ 1 2 ; z þ 1 2 ; (ii) x þ 1; y þ 1; z þ 1; (iii) x þ 1; y 3 2 ; z þ 1 2. Data collection: APEX2 (Bruker, 2008); cell refinement: SAINT (Bruker, 2008); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008); molecular graphics: ORTEP-3 (Farrugia, 1997); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009). The authors wish to thank Dr A. Chandramohan, Department of Chemistry, Sri Ramakrishna Mission Vidyalaya Arts and Science College, Coimbatore, India, for his valuable suggestions. Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: CI5096). Experimental Crystal data C 7 H 7 NOC 6 H 3 N 3 O 7 M r = Monoclinic, P2 1 =c a = (3) Å b = (3) Å c = (1) Å = (4) V = (10) Å 3 References Bernstein, J., Davis, R. E., Shimoni, L. & Chang, N.-L. (1995). Angew. Chem. Int. Ed. Engl. 34, Bruker (2008). APEX2, SAINT and SADABS. Bruker AXS Inc., Madison, Wisconsin, USA. Farrugia, L. J. (1997). J. Appl. Cryst. 30, 565. Goto, M., Kanno, H., Sugaya, E., Osa, Y. & Takayanagi, H. (2004). Anal. Sci. 20, x39 x40. In, Y., Nagata, H., Doi, M., Ishida, T. & Wakahara, A. (1997). Acta Cryst. C53, Nagata, H., In, Y., Doi, M., Ishida, T. & Wakahara, A. (1995). Acta Cryst. B51, Sheldrick, G. M. (2008). Acta Cryst. A64, Smith, G., Wermuth, U. D. & Healy, P. C. (2004). Acta Cryst. E60, o1800 o1803. Spek, A. L. (2009). Acta Cryst. D65, Zaderenko, P., Gil, M. S., López, P., Ballesteros, P., Fonseca, I. & Albert, A. (1997). Acta Cryst. B53, o1820 Sivaramkumar et al. doi: /s Acta Cryst. (2010). E66, o1820
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3 Acta Cryst. (2010). E66, o1820 [ doi: /s ] Benzamide-picric acid (1/1) M. S. Sivaramkumar, R. Velmurugan, M. Sekar, P. Ramesh and M. N. Ponnuswamy Comment 2,4,6-Trinitro phenol, popularly known as picric acid, was primarily used to manufacture explosives and also used as an intermediate in dye manufacturing. It is well known that picric acid forms charge transfer molecular complexes with a number of aromatic compounds such as aromatic hydrocarbons, amines etc. through electrostatic or hydrogen bonding interactions (In et al., 1997; Zaderenko et al., 1997). The crystal structures of a large number of picrate salts and picric acid complexes have been studied to understand the conformational features and charge transfer processes (Nagata et al., 1995; Smith et al., 2004; Goto et al., 2004). We report here the crystal structure of the title compound. In the picric acid molecule (Fig.1), one of the nitro groups lies in the plane of the attached benzene ring and other two rings are twisted away by 9.9 (1) [N1/O2/O3] and 30.3 (1) [N3/O6/O7]; the hydroxyl O atom deviates from the attached benzene ring by (1) Å. In the benzamide molecule, the amide group is almost coplanar with the benzene ring (C7 C12) [dihedral angle is 4.4 (1) ]. The sum of the bond angles around the atom N4 (359.9 ) of the amide group is in accordance with sp 2 hybridization. An intramolecular O1 H1 O2 hydrogen bond forms an S6 ring motif (Bernstein et al., 1995). The molecules at (x, y, z) and (1-x, 1-y, 1-z) are linked by pairs of C5 H5 O6 intermolecular hydrogen bonds forming 2 a centrosymmetric dimer containing R 2 (10) ring motif (Table 1). Atom N4 at (x, y, z) acts as a donor to atom O8 at (-x, 1/2 + y, 1/2 -z) forming a C4 zigzag chain running along the b axis. The crystal packing is controlled by O H O, N H O and C H O types of intermolecular hydrogen bonds, which form a three-dimensional network (Fig.2). An intermolecular O2 O8 short contact of (2) Å is observed. Experimental Picric acid (2.29 g) dissolved in methanol was added dropwise to a methanolic solution of benzamide (1.21 g). The solution was stirred at room temperature for 2 h. Single crystals suitable for X-ray analysis are obtained by repeated recrystallization of the salt from pure methanol. Refinement The O- and N-bound H atoms were located in a difference map and refined isotropically. The remaining H atoms were positioned geometrically (C H = 0.95 Å) and allowed to ride on their parent atoms, with U iso (H) = 1.2U eq (C). sup-1
4 Figures Fig. 1. The asymmetric unit of the title compound. Displacement ellipsoids are drawn at the 50% probability level. Fig. 2. The crystal packing of the title compound, viewed down the b axis. Benzamide picric acid (1/1) Crystal data C 7 H 7 NO C 6 H 3 N 3 O 7 F(000) = 720 M r = D x = Mg m 3 Monoclinic, P2 1 /c Mo Kα radiation, λ = Å Hall symbol: -P 2ybc Cell parameters from 1043 reflections a = (3) Å θ = b = (3) Å µ = 0.14 mm 1 c = (1) Å T = 110 K β = (4) Block, colourless V = (10) Å mm Z = 4 Data collection Bruker SMART APEXII area-detector diffractometer Radiation source: fine-focus sealed tube graphite R int = independent reflections 2518 reflections with I > 2σ(I) ω and φ scans θ max = 29.2, θ min = 3.0 Absorption correction: multi-scan (SADABS; Bruker, 2008) T min = 0.970, T max = h = 9 10 k = measured reflections l = Refinement Refinement on F 2 Primary atom site location: structure-invariant direct methods sup-2
5 Least-squares matrix: full R[F 2 > 2σ(F 2 )] = wr(f 2 ) = Secondary atom site location: difference Fourier map Hydrogen site location: inferred from neighbouring sites H atoms treated by a mixture of independent and constrained refinement S = 1.02 w = 1/[σ 2 (F 2 o ) + (0.0535P) P] where P = (F 2 o + 2F 2 c )/ reflections (Δ/σ) max = parameters Δρ max = 0.28 e Å 3 0 restraints Δρ min = 0.27 e Å 3 Special details Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. Refinement. Refinement of F 2 against ALL reflections. The weighted R-factor wr and goodness of fit S are based on F 2, conventional R-factors R are based on F, with F set to zero for negative F 2. The threshold expression of F 2 > σ(f 2 ) is used only for calculating R- factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F 2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å 2 ) x y z U iso */U eq O (15) (16) (4) (3) H (3) (4) (10) (8)* O (15) (16) (4) (3) O (16) (18) (5) (3) O (17) (18) (5) (3) O (15) (18) (4) (3) O (16) (17) (4) (3) O (16) (16) (5) (3) N (17) (19) (5) (3) N (17) (2) (5) (3) N (16) (18) (5) (3) C (19) (2) (6) (3) C (2) (2) (6) (3) C (2) (2) (6) (3) H * C (2) (2) (6) (3) C (2) (2) (6) (3) H * C (19) (2) (6) (3) O (16) (16) (4) (3) N (19) (2) (6) (3) H4A (3) (3) (9) (6)* sup-3
6 H4B (3) (3) (8) (6)* C (2) (2) (6) (3) C (2) (2) (6) (3) H * C (2) (2) (6) (4) H * C (2) (2) (6) (4) H * C (2) (2) (6) (4) H * C (2) (2) (6) (3) H * C (2) (2) (6) (3) Atomic displacement parameters (Å 2 ) U 11 U 22 U 33 U 12 U 13 U 23 O (6) (6) (6) (5) (4) (4) O (6) (6) (6) (5) (5) (5) O (7) (7) (7) (6) (5) (5) O (8) (7) (8) (6) (6) (5) O (7) (7) (6) (6) (5) (5) O (7) (7) (6) (6) (5) (5) O (7) (6) (6) (6) (5) (5) N (7) (7) (7) (6) (5) (5) N (7) (7) (7) (6) (5) (6) N (7) (7) (7) (6) (5) (5) C (7) (7) (7) (7) (6) (6) C (7) (8) (7) (7) (6) (6) C (8) (7) (8) (7) (6) (6) C (8) (8) (7) (7) (6) (6) C (8) (8) (7) (7) (6) (6) C (8) (7) (7) (6) (6) (6) O (7) (6) (6) (5) (5) (5) N (8) (7) (7) (7) (6) (6) C (7) (8) (7) (6) (6) (6) C (8) (8) (8) (7) (6) (6) C (8) (8) (9) (7) (7) (6) C (9) (9) (8) (8) (7) (7) C (9) (9) (8) (8) (6) (7) C (8) (8) (8) (7) (6) (6) C (8) (8) (8) (7) (6) (6) Geometric parameters (Å, ) O1 C (19) C5 H O1 H (3) O8 C (19) O2 N (17) N4 C (2) O3 N (17) N4 H4A 0.87 (2) sup-4
7 O4 N (18) N4 H4B 0.90 (2) O5 N (18) C7 C (2) O6 N (17) C7 C (2) O7 N (17) C7 C (2) N1 C (19) C8 C (2) N2 C (2) C8 H N3 C (2) C9 C (2) C1 C (2) C9 H C1 C (2) C10 C (2) C2 C (2) C10 H C3 C (2) C11 C (2) C3 H C11 H C4 C (2) C12 H C5 C (2) C1 O1 H (16) C5 C6 N (13) O3 N1 O (14) C1 C6 N (13) O3 N1 C (13) C13 N4 H4A (14) O2 N1 C (13) C13 N4 H4B (13) O5 N2 O (14) H4A N4 H4B (19) O5 N2 C (13) C8 C7 C (15) O4 N2 C (13) C8 C7 C (14) O6 N3 O (14) C12 C7 C (15) O6 N3 C (12) C9 C8 C (15) O7 N3 C (12) C9 C8 H O1 C1 C (14) C7 C8 H O1 C1 C (14) C8 C9 C (16) C2 C1 C (13) C8 C9 H C3 C2 C (14) C10 C9 H C3 C2 N (14) C11 C10 C (15) C1 C2 N (14) C11 C10 H C4 C3 C (14) C9 C10 H C4 C3 H C10 C11 C (16) C2 C3 H C10 C11 H C3 C4 C (14) C12 C11 H C3 C4 N (14) C11 C12 C (16) C5 C4 N (14) C11 C12 H C6 C5 C (14) C7 C12 H C6 C5 H O8 C13 N (15) C4 C5 H O8 C13 C (14) C5 C6 C (14) N4 C13 C (14) O1 C1 C2 C (14) O1 C1 C6 C (14) C6 C1 C2 C3 0.3 (2) C2 C1 C6 C5 1.2 (2) O1 C1 C2 N1 0.1 (2) O1 C1 C6 N3 1.1 (2) C6 C1 C2 N (13) C2 C1 C6 N (13) O3 N1 C2 C3 9.0 (2) O6 N3 C6 C (2) O2 N1 C2 C (13) O7 N3 C6 C (14) O3 N1 C2 C (14) O6 N3 C6 C (14) O2 N1 C2 C1 9.1 (2) O7 N3 C6 C (2) sup-5
8 C1 C2 C3 C4 1.2 (2) C12 C7 C8 C9 0.2 (2) N1 C2 C3 C (13) C13 C7 C8 C (14) C2 C3 C4 C5 0.6 (2) C7 C8 C9 C (2) C2 C3 C4 N (13) C8 C9 C10 C (2) O5 N2 C4 C (14) C9 C10 C11 C (2) O4 N2 C4 C3 0.8 (2) C10 C11 C12 C7 0.4 (2) O5 N2 C4 C5 1.6 (2) C8 C7 C12 C (2) O4 N2 C4 C (14) C13 C7 C12 C (15) C3 C4 C5 C6 0.8 (2) C8 C7 C13 O8 3.8 (2) N2 C4 C5 C (13) C12 C7 C13 O (15) C4 C5 C6 C1 1.8 (2) C8 C7 C13 N (14) C4 C5 C6 N (13) C12 C7 C13 N4 4.7 (2) Hydrogen-bond geometry (Å, ) D H A D H H A D A D H A O1 H1 O (3) 1.92 (3) (16) 132 (2) O1 H1 O (3) 1.85 (3) (16) 130 (2) N4 H4A O7 i 0.87 (2) 2.33 (2) (2) 150 (2) N4 H4B O8 i 0.90 (2) 2.08 (2) (19) 167 (2) C5 H5 O6 ii (2) 152 C9 H9 O4 iii (2) 129 Symmetry codes: (i) x, y+1/2, z+1/2; (ii) x+1, y+1, z+1; (iii) x+1, y 3/2, z+1/2. sup-6
9 Fig. 1 sup-7
10 Fig. 2 sup-8
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