Food Safety and Inspection Service. Emilio Esteban, DVM, MPVM, MBA, PhD FSIS-Office of Public Health Science
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2 Emilio Esteban, DVM, MPVM, MBA, PhD FSIS-Office of Public Health Science
3 E. coli O157:H7 and Salmonella analysis Ground Product MT05 Routine Testing of Raw Ground Beef at Retail MT06 Follow-up Sampling of Raw Ground Beef in Response to a Positive MT05 MT08 Routine Testing of Imported Raw Ground Beef MT43 Routine Testing of Raw Ground Beef in Federal Establishments. MT44 Follow-up Sampling of Raw Ground Beef Product in Response to a Pos MT43 MT44T Follow-up Raw Ground Beef or Raw Ground Beef Component Sampling: Components at the grinder Response to a recall based on State epidemiological data Current production from an establishment linked to an outbreak Extra raw ground beef samples at an establishment following numerous trim samples.
4 E. coli O157:H7, Salmonella, and non-o157 STEC Beef Trim MT51 Routine Testing of Imported Raw Beef Manufacturing Trimmings and Components MT52 Testing of Beef Manufacturing Trimmings or Other Components From Originating Slaughter Suppliers, Based on an MT43 Positive Result, at Federal Establishments MT53 Follow-up Testing of Positives from Routine Testing of Beef Manufacturing Trimmings (MT60) Routine Testing of Other Components (MT54) Positive MT52 Samples MT54 Routine Testing of Domestic Components Other than Trim MT55 Routine Testing of Bench Trim, Derived from Cattle Not Slaughtered at the Establishment MT60 Routine Testing of Domestic Raw Beef Manufacturing Trimmings
5 Number Positive Project # Salm O157 STEC PSTHR PRECH T
6 Percent Positive Project # Salm O157 STEC PSTHR % 1.91% 9.77% PRECH % 0.80% 2.70% % 0.00% 0.00% % 0.07% % 1.18% 44 T % 0.93% % 0.17% 0.00% % 1.98% 0.99% % 0.16% 1.26% % 0.43% % 0.00% % 0.11% 0.64% 6
7 Percent Positive Project # Salm O157 STEC PSTHR % 1.91% 9.77% PRECH % 0.80% 2.70% % 0.00% 0.00% % 0.07% % 1.18% 44 T % 0.93% % 0.17% 0.00% % 1.98% 0.99% % 0.16% 1.26% % 0.43% % 0.00% % 0.11% 0.64% 7
8 Number Positive By Plant Size Project Large Small Very Small Not identified # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC PSTHR PRECH T
9 Number Positive By Plant Size Project Large Small Very Small Not identified # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC PSTHR PRECH T
10 Percent Positive By Plant Size Project Large Small Very Small Not Identified # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC PSTHR % 2.65% 5.01% % 1.32% 13.82% % 2.07% 8.81% % 0.00% 0.00% PRECH % 0.00% 0.29% % 0.87% 4.59% % 2.05% 2.56% % 0.00% 0.00% % 0.00% 0.00% % 0.10% % 0.08% % 0.06% % 0.00% 0.00% % 1.52% % 0.00% 44 T % 0.00% % 1.82% % 0.17% 0.00% % 0.00% 0.00% % 3.51% 1.75% % 0.00% 0.00% % 0.24% 1.46% % 0.00% 2.60% % 0.00% % 0.00% % 1.04% % 0.00% % 0.00% % 0.00% % 0.00% % 0.00% % 0.00% 0.10% % 0.18% 0.92% % 0.16% 0.95% % 0.00% 0.81% 2.24% 0.04% 0.04% 2.03% 0.14% 0.22% 1.90% 0.10% 0.16% 1.15% 0.06% 0.06% 10
11 Percent Positive By Plant Size Project Large Small Very Small Not Identified # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC # Salm O157 STEC PSTHR % 2.65% 5.01% % 1.32% 13.82% % 2.07% 8.81% % 0.00% 0.00% PRECH % 0.00% 0.29% % 0.87% 4.59% % 2.05% 2.56% % 0.00% 0.00% % 0.00% 0.00% % 0.10% % 0.08% % 0.06% % 0.00% 0.00% % 1.52% % 0.00% 44 T % 0.00% % 1.82% % 0.17% 0.00% % 0.00% 0.00% % 3.51% 1.75% % 0.00% 0.00% % 0.24% 1.46% % 0.00% 2.60% % 0.00% % 0.00% % 1.04% % 0.00% % 0.00% % 0.00% % 0.00% % 0.00% % 0.00% 0.10% % 0.18% 0.92% % 0.16% 0.95% % 0.00% 0.81% 2.24% 0.04% 0.04% 2.03% 0.14% 0.22% 1.90% 0.10% 0.16% 1.15% 0.06% 0.06% 11
12 Non-O157 STEC test results Project Large Small Very Small O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 PSTHR PRECH
13 Non-O157 STEC test results Project Large Small Very Small O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 PSTHR PRECH
14 Non-O157 STEC test results Project Large Small Very Small O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 PSTHR PRECH
15 Non-O157 STEC test results Project Large Small Very Small O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 O26 O45 O103 O111 O121 O145 PSTHR PRECH
16 Number positive by Slaughter Class Project Beef Veal # Sal O157 STEC # Sal O157 STEC 43 10, , , ,
17 Number positive by Slaughter Class Project Beef Veal # Sal O157 STEC # Sal O157 STEC 43 10, , , ,
18 Percent positive by Slaughter Class Project Beef Veal # Sal O157 STEC # Sal O157 STEC 43 10, % 0.07% % 0.00% % 0.00% % 10.00% % 0.29% % 0.00% % 0.00% 0.00% % 11.11% 5.56% % 0.18% 0.70% % 0.00% 7.69% % 0.44% % 0.00% 55 1, % 0.00% % 0.00% 60 2, % 0.11% 0.51% % 0.00% 6.78% 15, % 0.09% 0.11% % 1.74% 5.81% 18
19 Percent positive by Slaughter Class Project Beef Veal # Sal O157 STEC # Sal O157 STEC 43 10, % 0.07% % 0.00% % 0.00% % 10.00% % 0.29% % 0.00% % 0.00% 0.00% % 11.11% 5.56% % 0.18% 0.70% % 0.00% 7.69% % 0.44% % 0.00% 55 1, % 0.00% % 0.00% 60 2, % 0.11% 0.51% % 0.00% 6.78% 15, % 0.09% 0.11% % 1.74% 5.81% 19
20 Method Performance Screened Potential Presumptive Confirmed STEC 4, O157 17, Screened Potential Presumptive Confirmed STEC 4, % 13.9% 90.9% O157 17, % 30.2% 73.1% 20
21 : Conclusions for FY 2015 (partial) Setting all raw beef programs to detect multiple targets and year round Baseline shows interventions work Baseline shows three different contamination patterns based on plant size Positives: about 1.5% (sal), 0.1% (O157), and 0.6% (STEC) O26, O103, and O111 most common serogroups; minimal coinfections, all targets found in baseline Most from follow up programs (MT52, MT53) Most from small and very small producers Method performance consistent and expected, ~80-90% of presumptive positive confirm 21
22 : Nutritional Composition 90 samples collected Sep 2014 thru July 2015 (not all months have 10 eligible samples) 75 Federal samples, 15 Retail samples Samples with variation greater than 20% Fat: 25/ %\ 3 of 15 (retail); 22 of 75 (Federal) Sodium: 2/90 2.2% Protein: no issues 22
23 : Evolution of Pesticide Screen Capability April 2015: 108 Analytes April 2011: 57 July 2014: 88 Beef Pork Poultry Goat Sheep Horse Catfish Matrices 23
24 : Evolution of Pesticide Screen Capability Pesticide Classes Benzimidazoles Carbamates Conazoles/Triazoles Organophosphates Imidazoles Organonitrogen Compounds Halogenated Compounds Pyrethroids Triazines 24
25 : Evolution of Multi-Class Residue Method Pending: 90 Analytes February 2012: 51 February 2013: 53 February 2014: 53 Beef Pork Poultry Goat Sheep Catfish Species 25
26 : Drug Classes Detected by the Multi-residue Method. Drug Classes Sulfonamides Beta-Agonists Phenicols Tetracyclines Hormones General Drugs Beta-Lactams & Cephalosporins Macrolides & Lincosamides Analgesics & Antiinflammatory drugs Fluoroquinolones 26
27 : Evolution of Metals Residue Method Metals Matrices Prior to NRP Redesign After NRP Redesign 2 (Pb, Cd) 2 (Pb, Cd) 15 (Se, Mn, Mo, Tl, Co, Fe, Zn, Cu, Ni, Al, B, Ba, Cr, V, Sr) Muscle, Liver, Kidney of Beef, Pork, Poultry Muscle, Liver, Kidney of Beef, Pork, Poultry; Processed Products; Catfish Muscle Processed Products, Muscle of Beef, Pork, Poultry 27
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